A podcast on PRRS to enjoy over the week-end

Podcasts are a perfect way to get caught up with new swine information! We are presenting you the latest episode from “At The Meeting… Honoring Dr. Bob Morrison” in collaboration with SwineCast.

This episode, recorded last month, is the first part of a two-part series on PRRS history, the major milestones, and the lessons learned in the past 30 years. Drs. Torremorell, Spronk, and Wetzel are talking with Dr. Scott Dee from Pipestone Veterinary Services and Dr. Reid Philips from Boehringer-Ingleheim.

Listen to the podcast (22 minutes)

PRRSv RFLP pattern changes in the USA

This is our Friday rubric: every week a new Science Page from the Bob Morrison’s Swine Health Monitoring Project. The previous editions of the science page are available on our website.

Key Points

  • MSHMP continues monitoring PRRSv RFLP patterns associated with outbreaks in participant systems.
  • The proportion of reported 1-7-4 outbreaks decreased significantly from July 2018 compared to that from January 2017 to June 2018.
  • The proportions of reported 1-8-4, 1-4-4, 1-3-4, 1-10-2, and 1-1-2 outbreaks have not changed significantly in recent years.
Continue reading “PRRSv RFLP pattern changes in the USA”

New $3 million grant helps researchers tackle PRRSv

University of Minnesota scientists are collaborating to look at how PRRS virus evolves to understand disease spread, and advance mitigation and control efforts

ST. PAUL, MINNESOTA —- A new grant of nearly $3 million will help University of Minnesota College of Veterinary Medicine (CVM) researchers and collaborators at the University of Edinburgh’s Roslin Institute investigate how porcine reproductive and respiratory syndrome (PRRS) virus evolves and spreads. The research will help scientists and producers anticipate a herd’s susceptibility to different strains of PRRS virus, and customize mitigation efforts accordingly. The data generated could be used to inform future vaccine designs. The grant is funded jointly by the National Institute of Food and Agriculture, National Science Foundation, National Institutes of Health, and the United Kingdom Government’s Biotechnology and Biological Sciences Research Council. It will cover the next four years of research. 

PRRS virus costs the US swine industry more than $560 million each year. First described in Indiana, North Carolina, Iowa, and Minnesota in the late 1980s, the virus rapidly spreads within barns and between farms. It has since remained one of the industry’s biggest game changers. Since its emergence in the United States, scientists have worked to reduce its impact.

But while a host may build immunity to a certain strain of PRRS virus after infection, that strain—as with any RNA virus—can counter-evolve to survive in that host and spread. And viruses often compete for hosts—some are better than others at evading the host’s immunity, depending on what that host is used to. This process is called “multistrain dynamics,” and has been investigated extensively in human medicine, but has rarely been explored in animals—until now. This project aims to help farmers understand how PRRS virus evolves, changes, moves, and persists. It also helps producers explore ways of out-maneuvering PRRS virus.

As with many RNA viruses, PRRS virus rapidly evolves and acquires genetic changes over time. However, scientists can study and potentially predict the genetic diversity of PRRS virus in pigs better than they can study other viruses in humans or wildlife because of the rich availability of data—they know where farms are, so they know what the distribution of hosts looks like. They also know how animals are moving between farms, and there is already a lot of ongoing sequencing, so scientists know where and when strains of the virus occur. Researchers don’t have this information readily available for studying the same questions in a human virus.

Kim VanderWaal, PhD, assistant professor in the Department of Veterinary Population Medicine (VPM) at the CVM, is the principal investigator on the project. She says, “Studying PRRS virus’s evolution will help us better understand and hopefully control PRRS virus, but it will also help us understand the evolution and drivers of genetic diversity in viruses in humans and other animals.”  

The U of M Veterinary Diagnostic Laboratory has been collecting samples of the PRRS virus for nearly three decades. As part of the grant’s research team,  Albert Rovira, DVM, PhD, an associate professor in the VPM, and his team will continue to sequence small parts of RNA from the lab’s collection to determine which samples are new variations of the virus. “We also have hundreds of virus isolates saved in the lab’s freezer,” says Rovira, who notes that these isolates could be used to infect pigs during the research. 

The project is partially built on data collected by the Morrison Swine Health Monitoring Project (MSHMP) at the University of Minnesota, which tracks the occurrence of PRRS virus in roughly 50% of the United States’ breeding swine population. MSHMP is coordinated by Cesar Corzo, DVM, MS, PhD, associate professor in the VPM, who is also on the research team for this grant. “One of the reasons Minnesota is so ideally situated for this research is that this dataset is one-of-a-kind,” says VanderWaal.

Another specific asset to this team’s approach is the contributions of Declan Schroeder, PhD, virologist and associate professor in the VPM. Schroeder’s lab was able to develop a new technique that can describe the full genomic strain profile of PRRS virus within 24 hours of sampling. Schroeder says this research can give veterinarians a better tool to rapidly diagnose the infection in animals.

This work is also extremely timely. Another part of this project aims to track the spread of different strains of PRRS virus, including newly evolved ones. “An emergence of a new strain was last seen in 2014,” says VanderWaal. “and we see a general pattern where a significant new type or strain appears every three to five years.”

PRRS incidence rate trends from 2015 to 2019 in the United States

This is our Friday rubric: every week a new Science Page from the Bob Morrison’s Swine Health Monitoring Project. The previous editions of the science page are available on our website.

Key Points

  • Overall PRRS weekly incidence rate appear to have increased from 2015 to 2019, mostly due to the effect of a group of systems that joined the project after 2013.
  • PRRS weekly incidence rate has been decreasing slightly since 2015 in the cohort of the 13 systems that initiated the project.
  • The reasons for the apparent increase in the weekly incidence rate in a group of systems are largely unknown and should be further investigated.
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PCR clamping for selectively sequencing wild-type PRRSV in vaccinated herds

This is our Friday rubric: every week a new Science Page from the Bob Morrison’s Swine Health Monitoring Project. The previous editions of the science page are available on our website.

This week, we are sharing a report by Harmon et al. from Iowa State University regarding PCR clamping. This project was funded by AAVLD Thermo Fisher Innovation Grant in Veterinary Diagnostic Medicine and ISU-VDL.

Key points

  • Conventional ORF5 sequencing may not differentiate between wild-type or vaccine-like.
  • Blocking the amplification of vaccine-like sequences it is possible to increase the likelihood of wild-type amplification.
  • Clamping allows the amplification of the wild-type with mixtures containing as little as 10% of a mixture with the vaccine-like.
Continue reading “PCR clamping for selectively sequencing wild-type PRRSV in vaccinated herds”